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When engaging the sequencer the only visable in the display is the expression values and if I don't stop the sequencer before I change preset, it's almost impossible to know/see what preset I landed on.
Yeah, no doubt that you have to be fast. I use the same sequencer with the PitchFactor, and I don't know of any current way around what you're describing. And – if you have an expression pedal thru connected – you're really screwed if you bump it and a knob while the sequencer is in Play mode. Suddenly, you have more programmed parameters sequencing.
To be fair, I can't see how Eventide could anticipate users bombarding the expression pedal input like this. For what it's worth, it becomes a little easier controlling program changes over MIDI. I find myself not as dependent on the Eventide readout, and it prevents the on-the-fly programming mishaps.